misterPCR

Exactly, I do know the SNPs of that regions (or I could get that info easily), but if I have to do that for all the regions, It would take me ages. I have 261 patients of one mental disorder (Tourette syndrome) with 20.000 genomic regions with a deletion or a duplication of regions (about 76 per patient) compared with controls. The most relevants are the exonics CNV, obviously. My data is excel format. But I have as well the origianl format from the Affymetrix software ChAS (which is .cychp). I am sure Im not the first researcher with this problem, should be something

Yes, it could work for one or a few genetic regions, what I guess it should be something to do that automatically with about 200 regions at the same time. Some kind of tool to help me filtering all my candidate regions to just the ones which are on exonic regions About the HPC systems, could be, but I know browser that can deal with huge amount of regions and check their protein-protein interactions....but I dont know a browser about differenciating between exonic/intronic regions

Hello people, I am investigating about candidate CNV (copy number varations) which could play an important role in the development of some complex diseases. I wonder if there are any browser or software which could help me to know which of the huge amount of genetic regions of different patients, belong to exonic regions. Thanks in advance.