So I'm bulking up my DNA constructs and I ran them on the gel today.
I saw RNA in one of my lanes.
my co worker told me i could use phenol and some washes to get rid of RNA or use a kit she had gotten from a biotech company.
i chose the latter because, hey its phenol.
i went thru all the steps but after a few washes, i did not see any pellet and when i put it thru the nanodrop. it came out with negative nanograms per microliter.
ok not good.
so where the hell in the washing steps could have gone wrong?
i was careful in the washing, i pippett only the SN and nothing more.
the only thing i can think of is, i left the solution in over 2 minutes the suggested time.
the solution was the kits' ligase wash.
so i dontknow if that would have done it.
i mean before i did this, i had 1050 ng/ul of dna and rna in the sample.
any suggestions?