Several things:
1. The chemistry of the grapes can change depending on how they grown - many of the chemicals that are associated with the taste and color of wines are produced in response to the plant's age, health, environmental conditions, etc. One of the best known compounds from grapes which has been associated with all kinds of health benefits is called resveratrol and is actually produced in grapes in response to stress. So, in that way, the same species of grapevine could produce grapes with vastly different chemical compositions.
2. The processing during winemaking is not always the same. Fermentation conditions can be different and so on.
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