I'm sorry, I'm not get the point you try telling me.
We have several untitled culture of microbe at my lab. I want to know the genus or the species of the microbe. I doing it by extracting the DNA genome and amplify the specific region of 16s rRNA. Than I'll Blast the sequence to get the distance tree result. the purposes of my work is to identify the genus and species of our microorganism.
So what is the differences sequence data that gained from RNA and DNA. the sequence will give same result in blast and distance tree analysis, am i right??
regards.