Hi,
I'm having problems in b-galactosidase stability during luciferase assays. Typically we transfect cells (different cell lines) with Lipo2000 in 24wp using 0.15ug pGL3 luciferase-reporter gene; 0.1 ug SV40-bgal (or 0,025 ug pCMV-bgal) plus 0,3ug of our different repressors of interest (some of them also under pCMV control). We made equal the final amount of DNA/well with pBSKTT gene. We transfect them during 4-6-12h and change the medium and analyze by luminometryafter 48h .
We observed good luciferase signals (low background, 200-300.000 RLU).
We measure b-gal adding corresponding substrates (sometimes the half of the indicated reactive) and after 1h of incubation.
About b-gal... measures indicate high background signal (40.000) and low transfection (similar to background-although luciferase doesn't indicates this!) or good signals (300.000) in comparison to background but with great fluctuation (from 20.000-1x10^6). My boss thinks they should mantain constant.
So, what's happening? We are questioning everything! DNA quality seems to be good (A260/280=1.8) although differences in bacteria transformation have been seen depending on which plasmid you're growing. Is b-gal a good indicator of transfection efficiency or is it also modulated? Low backgrounds are typically solved doing 1h at 50ºC. However, when we did it, everything was "dead". We have also compared different kits (Clontech, Roche, Tropics) and although the signal changes the proportion is mantained. Why does b-gal change depending on the cotransfected plasmid? Looking at the bibliography some people offer alternative techniques such as Slot blot, PCR...which involve quite a lot of work for a periodical technique.
We are also thinking about using Renilla as measure of transfection efficiency; although some workmate has also observed variations in presence of TGF-b.
It's kind of a common technique, and any kind of help about this topic would be really appreciated!!
Thanks a lot!