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Both are structurally as well as functionally unrelated.

A signal anchor is both a signal sequence for the translocation as well as the anchor itself.

Proteins that are to be attached in the membrane with a GPI anchor first need an N-terminal signal peptide, that is cleaved during the translocation of the protein, and a C-terminal site, the GPI-modification site onto which the GPI-moiety is post-translationally coupled. In other words the GPI modification siteonly only serves as a recognition site for the coupling of the GPI-anchor, but is not involved in translocation, nor does directly attach to the membrane.

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